Introduction and Overview

Welcome to our exploration into Interpreting Principal Component Analysis (PCA) Results and its Application in Machine Learning. Today, we will first generate a synthetic dataset that has features inherently influenced by various factors built in. Next, we will computationally implement PCA and explore variable interactions. We will then compare the performance between models trained using the original features and the principal components derived from PCA. Let's dive right in!

Benefits of Integrating PCA-reduced data into ML models

Incorporating PCA-reduced data into Machine Learning models can significantly enhance our model's efficiency and lessen the issue of overfitting. PCA aids in reducing dimensionality without losing much information. This feature becomes increasingly useful when we deal with real-life datasets which have numerous attributes or features.

Synthetic Dataset Generation

Our first step is the creation of a synthetic dataset, which consists of several numeric features that naturally influence each other. The purpose of including these dependencies is to later determine if PCA can detect these implicit relationships among the features.

Now, let's put our data into a Pandas data frame:

This portion of the code generates random variables to simulate typical customer usage data. This includes usage facts such as monthly_charges, monthly_calls, and data_usage, and a binary variable churn is influenced by these features. All this data is assembled together in a DataFrame.

Preparation for PCA and Data Split

Before we can proceed to the PCA, it's necessary to scale our features using Standard Scaler. Additionally, we also need to perform a train-test split of our data.

Data scaling is necessary for PCA because it is a variance maximizing exercise. It projects your original data onto directions which maximize the variance. Thus we need to scale our data so that each feature has a unit variance.

Applying PCA

With the data prepared, let's apply PCA and evaluate its results.

In the code, PCA has been applied to the scaled training data, and the explained variance ratio is computed.

We can visualize the explained variance ratio using a scree plot:

This code generates a scree plot that shows the explained variance ratio by the number of components:

image

Deciding on the number of components to retain

Now, let's plot the cumulative explained variance by an increasing number of principal components and decide on the number to retain.

This part of the code calculates the number of principal components needed to retain at least 95% of the original data's variance.

Model Training and Evaluation with and without PCA

Finally, we will train Logistic Regression models on both sets of data, and compare.

The accuracy of a model trained on PCA-transformed data is computed.

The accuracy of a model trained on the original data without PCA transformation is also calculated for comparison. Notice that both models have the same accuracy score of 0.94, indicating that PCA did not affect the model's performance but reduced the number of features, therefore simplifying the model.

Conclusion

We have successfully covered creating a synthetic dataset, preparing the data, implementing PCA, determining the number of principal components to retain, and comparing accuracies of models trained with and without PCA. In the next lesson, we'll be delving deeper into PCA and other dimensionality reduction techniques. Happy learning!

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